Repositories list

• multiomix

  Public
  Multiomix platform source code

  pythondockerdjango+ 2

  pythondockerdjangobioinformaticsepigenomics

  TypeScript

  •

  GNU General Public License v3.0

  •22 forks•88 stars•00 issues•44 pull requests•Updated Apr 29, 2026Apr 29, 2026

• xena-tcga-gtex-expression-analysis

  Public
  DEA pipeline comparing TCGA and GTEx (Xena) with ready-to-use pre-processed data. Includes high-performance scripts for extracting TCGA and GTEx data from the U…

  R

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Jan 30, 2026Jan 30, 2026

• differential_expression_analysis

  Public
  tests of differential expression analysis

  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 1, 2025Dec 1, 2025

• sophie-mari

  Public
  Replication of the results of "Predicting tumor response to drugs based on gene-expression biomarkers of sensitivity learned from cancer cell lines"

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 7, 2025Apr 7, 2025

• modulector

  Public
  An open platform which provides information about miRNAs and genes from different popular databases

  gene-expressionpubmedmethylation+ 4

  gene-expressionpubmedmethylationmrnamirnamirna-mrna-interactionmultiomix

  Python

  •

  MIT License

  •00 forks•55 stars•00 issues•00 pull requests•Updated Jan 2, 2025Jan 2, 2025

• BioAPI

  Public
  A powerful abstraction of gene databases

  bioinformaticsgene-expressiongene-regulation+ 8

  bioinformaticsgene-expressiongene-regulationgene-ontologydrug-discoverygenesbioinformatics-tooldrug-target-interactionsgene-enrichmentgene-relationships+ 1

  Python

  •00 forks•77 stars•00 issues•00 pull requests•Updated Dec 17, 2024Dec 17, 2024

• omicsdatascience-site-new

  Public
  Dockerfile

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 14, 2024Nov 14, 2024

• Benchmarks-GGCA-vs-WGCNA

  Public
  This benchmark measures the performance of correlation algorithms using transcriptomic data between GGCA and WGCNA tools

  C

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 12, 2024Nov 12, 2024

• multiomix-aws-emr

  Public
  AWS EMR Spark Job abstraction for Multiomix project.

  Python

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Nov 21, 2023Nov 21, 2023

• omicsdatascience-site

  Public
  OmicsDatascience site source

  TypeScript

  •00 forks•11 star•00 issues•00 pull requests•Updated Nov 3, 2023Nov 3, 2023

• multiomix-backup-tool-gdrive

  Public
  A set of scripts in bash and python for generate multiomix backups and upload them into a google drive account.

  Shell

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 27, 2023Sep 27, 2023