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    10 repositories

    • LongPlex

      Public
      Nextflow
      •3•4•1•0•Updated Apr 29, 2026Apr 29, 2026

    • seqWell-ONT-dorado-demux

      Public
      demux of 384-well ONT data generated by seqWell kit using dorado
      Python
      •0•0•1•0•Updated Apr 28, 2026Apr 28, 2026

    • seqWell-ONT-plasmid-assembly

      Public
      Assembles plasmids from Oxford Nanopore reads generated using SeqWell-384 kits
      Nextflow
      •0•0•0•0•Updated Mar 19, 2026Mar 19, 2026

    • nextflow-pairwise-blast

      Public
      This Nextflow pipeline performs pairwise blast to support clonal identification analysis.
      Nextflow
      •0•0•0•0•Updated Oct 29, 2025Oct 29, 2025

    • nextflow-pairwise-alignment

      Public
      This Nextflow pipeline performs pairwise alignments to support clonal identification analysis.
      Nextflow
      •0•0•0•0•Updated Oct 28, 2025Oct 28, 2025

    • nextflow-pacbio-pasmid-flye-assembly

      Public
      Nextflow
      •1•0•0•0•Updated Aug 13, 2025Aug 13, 2025

    • longplexpy

      Public
      Python
      •1•1•0•0•Updated Jun 30, 2025Jun 30, 2025

    • demultiplex_fastq_from_bcl

      Public
      Python
      •0•1•0•0•Updated May 2, 2025May 2, 2025

    • plasmid_assembly_from_fastq

      Public
      Python
      •0•1•0•0•Updated May 2, 2025May 2, 2025

    • LIMA_demultiplex

      Public
      0•0•0•0•Updated Apr 3, 2024Apr 3, 2024
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