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@single-cell-data The SOMA project

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    6 repositories

    • TileDB-SOMA

      Public
      Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.
      single-cellsingle-cell-genomicstiledbtiledb-somatiledb-api
      Python
      •
      MIT License
      •30•120•92•11•Updated Jan 22, 2026Jan 22, 2026

    • SOMA

      Public
      A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.
      Python
      •
      MIT License
      •11•82•14•1•Updated Jan 22, 2026Jan 22, 2026

    • TileDB-SOMA-ML

      Public
      SOMA PyTorch loaders
      mlpytorchsomatiledbtiledb-soma
      Jupyter Notebook
      •
      MIT License
      •3•12•1•0•Updated Sep 24, 2025Sep 24, 2025

    • TileDB-SOMA-Test-Data

      Public
      Larger data files for the TileDB-SOMA project
      0•1•0•0•Updated Jul 24, 2025Jul 24, 2025

    • .github

      Public
      Profile content for the single-cell-data organization
      0•0•0•0•Updated Mar 16, 2023Mar 16, 2023

    • mams

      Public
      Matrix and Analysis Metadata Standards
      MIT License
      •3•9•4•0•Updated Mar 5, 2023Mar 5, 2023