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    • R
      0100Updated Feb 25, 2026Feb 25, 2026
    • Tutorials for statistical genetics short courses
      Dockerfile
      293930Updated Jan 7, 2026Jan 7, 2026
    • allanlab

      Public
      Allan Lab website
      SCSS
      1.3k000Updated Feb 20, 2025Feb 20, 2025
    • finemapr

      Public
      Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR
      R
      GNU General Public License v3.0
      15000Updated Feb 20, 2025Feb 20, 2025
    • Personal website
      HTML
      MIT License
      4000Updated Feb 20, 2025Feb 20, 2025
    • A list of deep learning implementations in biology
      489000Updated Feb 20, 2025Feb 20, 2025
    • A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
      650000Updated Feb 20, 2025Feb 20, 2025
    • GenGen

      Public
      A set of software tools to facilitate GWAS analysis
      C
      Other
      11000Updated Feb 20, 2025Feb 20, 2025
    • GWAS Tutorial for Beginners
      Jupyter Notebook
      97200Updated Feb 20, 2025Feb 20, 2025
    • This repository contains code used to recreated the figures and tables from the paper named "Mendelian non-syndromic and syndromic hearing loss genes contribut…
      Jupyter Notebook
      0000Updated Sep 26, 2024Sep 26, 2024
    • Comparing power to detect rare variant aggregate association using exome sequence data vs imputed data
      Jupyter Notebook
      0000Updated Jul 30, 2024Jul 30, 2024
    • jobs

      Public
      0000Updated Jan 16, 2024Jan 16, 2024
    • Jupyter Notebook
      2400Updated Jul 14, 2023Jul 14, 2023
    • RVFamSq

      Public
      R
      2001Updated Sep 9, 2022Sep 9, 2022
    • rvnpl

      Public
      C++
      MIT License
      2230Updated Aug 18, 2022Aug 18, 2022
    • cstatgen

      Public
      C++ statgen library for SEQPower, SEQLinkage and RV-NPL
      C++
      1010Updated Mar 16, 2022Mar 16, 2022
    • MendelProb: For the design of Mendelian studies
      R
      1001Updated Jul 15, 2021Jul 15, 2021
    • seqspark

      Public
      SEQSpark documentation
      Scala
      Apache License 2.0
      61870Updated Nov 17, 2020Nov 17, 2020
    • phenoman

      Public
      Automatically exported from code.google.com/p/phenoman
      Python
      2001Updated Jul 24, 2020Jul 24, 2020
    • https://statgenetics.github.io/rvnpl-notes/
      Jupyter Notebook
      0000Updated Jul 7, 2020Jul 7, 2020
    • SAIGE

      Public
      R
      GNU Lesser General Public License v3.0
      74000Updated Jan 15, 2020Jan 15, 2020
    • simped

      Public
      SimPed quickly generates haplotype and/or genotype data for large number of marker loci regardless of pedigree structure.
      0000Updated Aug 7, 2019Aug 7, 2019
    • simrare

      Public
      Automatically exported from code.google.com/p/simrare
      1000Updated Jul 29, 2019Jul 29, 2019
    • Python
      1010Updated Jul 29, 2019Jul 29, 2019
    • SEQPower

      Public
      Power Analysis and Sample Size Estimation Software for Sequence Based Association Studies
      Python
      GNU General Public License v2.0
      2000Updated Jun 10, 2019Jun 10, 2019
    • rv-tdt

      Public
      C++
      3210Updated May 5, 2019May 5, 2019
    • kbac

      Public
      KBAC Statistic Implementation
      C
      MIT License
      2000Updated Mar 27, 2019Mar 27, 2019
    • rv-gdt

      Public
      Python
      0240Updated Jul 18, 2018Jul 18, 2018
    • Collapsed Haplotype Pattern Method for Linkage Analysis of Next-Generation Sequencing Data
      Python
      MIT License
      6000Updated Mar 27, 2018Mar 27, 2018
    • Plans and slides for a four-hour short course in intermediate Git.
      TeX
      Other
      3000Updated Jul 2, 2017Jul 2, 2017
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