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Make linear predictor the default in CV when eta = 1

Status: Open.

#88 In pbreheny/plmmr;

· oscarrys opened on Apr 3, 2026

plmm_prep() should not scale a user-provided matrix

Status: Open.

#78 In pbreheny/plmmr;

· oscarrys opened on Aug 21, 2025

create_design() needs to address case where the matrix of unpenalized covariates is low rank

Status: Open.

#76 In pbreheny/plmmr;

· tabpeter opened on Jul 30, 2025

Package should have a predict.cv_plmm() method

Status: Open.

#75 In pbreheny/plmmr;

· pbreheny opened on Jul 29, 2025

diag_K doesn't make sense as an argument to plmm()

Status: Open.

#73 In pbreheny/plmmr;

· pbreheny opened on Jul 23, 2025

when design is a 'plmm_design' object and std_X is filebacked, plmm_checks fails

Status: Open.

#71 In pbreheny/plmmr;

· tabpeter opened on Jul 22, 2025

relatedness_mat(): Needs redesign, several issues

Status: Open.

#70 In pbreheny/plmmr;

· pbreheny opened on Jun 22, 2025

Potentially synthesize untransform_delim and untransform_plink

enhancementNew feature or requestNew feature or request

Status: Open.

#69 In pbreheny/plmmr;

· oscarrys opened on May 15, 2025

process_plink() is inflexible with the names supplied for rds_prefix

enhancementNew feature or requestNew feature or request

Status: Open.

#65 In pbreheny/plmmr;

· tabpeter opened on Dec 13, 2024

citation needs update

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#63 In pbreheny/plmmr;

· tabpeter opened on Nov 18, 2024

make option to store processed files in memory

enhancementNew feature or requestNew feature or request

Status: Open.

#62 In pbreheny/plmmr;

· oscarrys opened on Nov 11, 2024

make log files optional

enhancementNew feature or requestNew feature or request

Status: Open.

#53 In pbreheny/plmmr;

· tabpeter opened on Jul 10, 2024