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@populationgenomics

Centre for Population Genomics

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  1. talos talos Public

    Rare Disease variant reanalysis tool

    Python 25 12

  2. production-pipelines production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    Python 12 2

  3. saige-tenk10k saige-tenk10k Public

    Hail batch pipeline to run SAIGE on CPG's GCP

    Python 7 1

  4. cpg-cost-control cpg-cost-control Public

    A Cloud Function to handle GCP billing budget notifications.

    Python 6 3

  5. cuKING cuKING Public

    CUDA-based KING relatedness estimation

    Cuda 5

  6. ClinvArbitration ClinvArbitration Public

    A side-project from the AIP, containing the code, logic, and documentation for the ClinVar consequence reassessment process in use at the CPG

    Python 5 3

Repositories

Showing 10 of 95 repositories
  • talos Public

    Rare Disease variant reanalysis tool

    populationgenomics/talos’s past year of commit activity
    Python 25 MIT 12 15 6 Updated Jan 29, 2026
  • populationgenomics/cpg-flow-rdrnaseq’s past year of commit activity
    Python 0 MIT 0 0 1 Updated Jan 29, 2026
  • images Public

    Reusable single-software docker images

    populationgenomics/images’s past year of commit activity
    Dockerfile 1 MIT 2 1 10 Updated Jan 29, 2026
  • flowa Public
    populationgenomics/flowa’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 29, 2026
  • metamist Public

    Sample level metadata system

    populationgenomics/metamist’s past year of commit activity
    Python 3 MIT 2 40 33 Updated Jan 29, 2026
  • gnomad-browser Public Forked from broadinstitute/gnomad-browser

    Explore gnomAD datasets on the web

    populationgenomics/gnomad-browser’s past year of commit activity
    TypeScript 0 MIT 49 0 5 Updated Jan 29, 2026
  • production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    populationgenomics/production-pipelines’s past year of commit activity
    Python 12 MIT 2 48 (1 issue needs help) 44 Updated Jan 29, 2026
  • test_workflows_shared Public template
    populationgenomics/test_workflows_shared’s past year of commit activity
    Python 0 MIT 0 1 3 Updated Jan 29, 2026
  • cpg-flow Public

    CPG Pipeline Python API

    populationgenomics/cpg-flow’s past year of commit activity
    Python 0 MIT 0 6 7 Updated Jan 29, 2026
  • populationgenomics/ourdna-browser-ga’s past year of commit activity
    0 MIT 0 0 0 Updated Jan 29, 2026

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