UKBB-Diverse-pops

GWAS across all analyzable phenotypes and diverse ancestry groups in the UK Biobank.

A full description of how these summary statistics were generated and how to work with them can be found here: http://pan.ukbb.broadinstitute.org/.

Name		Name	Last commit message	Last commit date
Latest commit History 352 Commits
data		data
heritability		heritability
resources		resources
utils		utils
website		website
.gitignore		.gitignore
LICENSE		LICENSE
Pheasant-Pipeline-ega.sh		Pheasant-Pipeline-ega.sh
README.md		README.md
__init__.py		__init__.py
assign_phecodes.py		assign_phecodes.py
assign_pops.py		assign_pops.py
compute_ld_matrix.py		compute_ld_matrix.py
constants.R		constants.R
create_phecode_mapping.R		create_phecode_mapping.R
export_results.py		export_results.py
get_heritabilities.py		get_heritabilities.py
get_plink_subsets.py		get_plink_subsets.py
get_timings.py		get_timings.py
get_timings_null_model.py		get_timings_null_model.py
icd_counts_by_pop.R		icd_counts_by_pop.R
lambda_by_ac.R		lambda_by_ac.R
lambda_heritability.R		lambda_heritability.R
load_all_results.py		load_all_results.py
load_phenotype_data.py		load_phenotype_data.py
load_timings.py		load_timings.py
plink_clump.py		plink_clump.py
plink_clump_hail.py		plink_clump_hail.py
plot_ukbb_continental_pca.R		plot_ukbb_continental_pca.R
plot_ukbb_pca.R		plot_ukbb_pca.R
pre_process_saige_data.py		pre_process_saige_data.py
prs.py		prs.py
reengineering_phenofile_neale_lab2.r		reengineering_phenofile_neale_lab2.r
run_meta_analysis.py		run_meta_analysis.py
saige_pan_ancestry.py		saige_pan_ancestry.py
summary_statistics_analysis.py		summary_statistics_analysis.py
summary_statistics_qc.py		summary_statistics_qc.py
super_pop_pca.py		super_pop_pca.py
tsconfig.json		tsconfig.json
ukb_gnomad_comparison.R		ukb_gnomad_comparison.R

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