pypeit · kbwestfall · Oct 7, 2025 · Oct 8, 2025 · Oct 8, 2025 · Oct 8, 2025
diff --git a/doc/api/pypeit.alignframe.rst b/doc/api/pypeit.alignframe.rst
@@ -4,5 +4,5 @@ pypeit.alignframe module
 .. automodule:: pypeit.alignframe
    :members:
    :private-members:
-   :undoc-members:
    :show-inheritance:
+   :undoc-members:
diff --git a/doc/api/pypeit.archive.rst b/doc/api/pypeit.archive.rst
@@ -4,5 +4,5 @@ pypeit.archive module
 .. automodule:: pypeit.archive
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.bitmask.rst b/doc/api/pypeit.bitmask.rst
@@ -4,5 +4,5 @@ pypeit.bitmask module
 .. automodule:: pypeit.bitmask
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.bspline.bspline.rst b/doc/api/pypeit.bspline.bspline.rst
@@ -4,5 +4,5 @@ pypeit.bspline.bspline module
 .. automodule:: pypeit.bspline.bspline
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    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.bspline.rst b/doc/api/pypeit.bspline.rst
@@ -16,5 +16,5 @@ Module contents
 .. automodule:: pypeit.bspline
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.bspline.util.rst b/doc/api/pypeit.bspline.util.rst
@@ -4,5 +4,5 @@ pypeit.bspline.util module
 .. automodule:: pypeit.bspline.util
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.cache.rst b/doc/api/pypeit.cache.rst
@@ -4,5 +4,5 @@ pypeit.cache module
 .. automodule:: pypeit.cache
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.calibframe.rst b/doc/api/pypeit.calibframe.rst
@@ -4,5 +4,5 @@ pypeit.calibframe module
 .. automodule:: pypeit.calibframe
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.calibrations.rst b/doc/api/pypeit.calibrations.rst
@@ -4,5 +4,5 @@ pypeit.calibrations module
 .. automodule:: pypeit.calibrations
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.coadd1d.rst b/doc/api/pypeit.coadd1d.rst
@@ -4,5 +4,5 @@ pypeit.coadd1d module
 .. automodule:: pypeit.coadd1d
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.coadd2d.rst b/doc/api/pypeit.coadd2d.rst
@@ -4,5 +4,5 @@ pypeit.coadd2d module
 .. automodule:: pypeit.coadd2d
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.coadd3d.rst b/doc/api/pypeit.coadd3d.rst
@@ -4,5 +4,5 @@ pypeit.coadd3d module
 .. automodule:: pypeit.coadd3d
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.arc.rst b/doc/api/pypeit.core.arc.rst
@@ -4,5 +4,5 @@ pypeit.core.arc module
 .. automodule:: pypeit.core.arc
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.atmextinction.rst b/doc/api/pypeit.core.atmextinction.rst
@@ -4,5 +4,5 @@ pypeit.core.atmextinction module
 .. automodule:: pypeit.core.atmextinction
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.basis.rst b/doc/api/pypeit.core.basis.rst
@@ -4,5 +4,5 @@ pypeit.core.basis module
 .. automodule:: pypeit.core.basis
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.coadd.rst b/doc/api/pypeit.core.coadd.rst
@@ -4,5 +4,5 @@ pypeit.core.coadd module
 .. automodule:: pypeit.core.coadd
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.collate.rst b/doc/api/pypeit.core.collate.rst
@@ -4,5 +4,5 @@ pypeit.core.collate module
 .. automodule:: pypeit.core.collate
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.combine.rst b/doc/api/pypeit.core.combine.rst
@@ -4,5 +4,5 @@ pypeit.core.combine module
 .. automodule:: pypeit.core.combine
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.convert_DEIMOSsavfiles.rst b/doc/api/pypeit.core.convert_DEIMOSsavfiles.rst
@@ -4,5 +4,5 @@ pypeit.core.convert\_DEIMOSsavfiles module
 .. automodule:: pypeit.core.convert_DEIMOSsavfiles
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.datacube.rst b/doc/api/pypeit.core.datacube.rst
@@ -4,5 +4,5 @@ pypeit.core.datacube module
 .. automodule:: pypeit.core.datacube
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.extract.rst b/doc/api/pypeit.core.extract.rst
@@ -4,5 +4,5 @@ pypeit.core.extract module
 .. automodule:: pypeit.core.extract
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.findobj_skymask.rst b/doc/api/pypeit.core.findobj_skymask.rst
@@ -4,5 +4,5 @@ pypeit.core.findobj\_skymask module
 .. automodule:: pypeit.core.findobj_skymask
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.fitting.rst b/doc/api/pypeit.core.fitting.rst
@@ -4,5 +4,5 @@ pypeit.core.fitting module
 .. automodule:: pypeit.core.fitting
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.flat.rst b/doc/api/pypeit.core.flat.rst
@@ -4,5 +4,5 @@ pypeit.core.flat module
 .. automodule:: pypeit.core.flat
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.flexure.rst b/doc/api/pypeit.core.flexure.rst
@@ -4,5 +4,5 @@ pypeit.core.flexure module
 .. automodule:: pypeit.core.flexure
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.flux_calib.rst b/doc/api/pypeit.core.flux_calib.rst
@@ -4,5 +4,5 @@ pypeit.core.flux\_calib module
 .. automodule:: pypeit.core.flux_calib
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.framematch.rst b/doc/api/pypeit.core.framematch.rst
@@ -4,5 +4,5 @@ pypeit.core.framematch module
 .. automodule:: pypeit.core.framematch
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.gui.edge_inspector.rst b/doc/api/pypeit.core.gui.edge_inspector.rst
@@ -4,5 +4,5 @@ pypeit.core.gui.edge\_inspector module
 .. automodule:: pypeit.core.gui.edge_inspector
    :members:
    :private-members:
-   :undoc-members:
    :show-inheritance:
+   :undoc-members:
diff --git a/doc/api/pypeit.core.gui.gui_util.rst b/doc/api/pypeit.core.gui.gui_util.rst
@@ -4,5 +4,5 @@ pypeit.core.gui.gui\_util module
 .. automodule:: pypeit.core.gui.gui_util
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.gui.identify.rst b/doc/api/pypeit.core.gui.identify.rst
@@ -4,5 +4,5 @@ pypeit.core.gui.identify module
 .. automodule:: pypeit.core.gui.identify
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.gui.object_find.rst b/doc/api/pypeit.core.gui.object_find.rst
@@ -4,5 +4,5 @@ pypeit.core.gui.object\_find module
 .. automodule:: pypeit.core.gui.object_find
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.gui.rst b/doc/api/pypeit.core.gui.rst
@@ -19,5 +19,5 @@ Module contents
 .. automodule:: pypeit.core.gui
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.gui.skysub_regions.rst b/doc/api/pypeit.core.gui.skysub_regions.rst
@@ -4,5 +4,5 @@ pypeit.core.gui.skysub\_regions module
 .. automodule:: pypeit.core.gui.skysub_regions
    :members:
    :private-members:
-   :undoc-members:
    :show-inheritance:
+   :undoc-members:
diff --git a/doc/api/pypeit.core.meta.rst b/doc/api/pypeit.core.meta.rst
@@ -4,5 +4,5 @@ pypeit.core.meta module
 .. automodule:: pypeit.core.meta
    :members:
    :private-members:
-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.moment.rst b/doc/api/pypeit.core.moment.rst
@@ -4,5 +4,5 @@ pypeit.core.moment module
 .. automodule:: pypeit.core.moment
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.mosaic.rst b/doc/api/pypeit.core.mosaic.rst
@@ -4,5 +4,5 @@ pypeit.core.mosaic module
 .. automodule:: pypeit.core.mosaic
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.parse.rst b/doc/api/pypeit.core.parse.rst
@@ -4,5 +4,5 @@ pypeit.core.parse module
 .. automodule:: pypeit.core.parse
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.pca.rst b/doc/api/pypeit.core.pca.rst
@@ -4,5 +4,5 @@ pypeit.core.pca module
 .. automodule:: pypeit.core.pca
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.pixels.rst b/doc/api/pypeit.core.pixels.rst
@@ -4,5 +4,5 @@ pypeit.core.pixels module
 .. automodule:: pypeit.core.pixels
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.plot.rst b/doc/api/pypeit.core.plot.rst
@@ -4,5 +4,5 @@ pypeit.core.plot module
 .. automodule:: pypeit.core.plot
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.procimg.rst b/doc/api/pypeit.core.procimg.rst
@@ -4,5 +4,5 @@ pypeit.core.procimg module
 .. automodule:: pypeit.core.procimg
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.pydl.rst b/doc/api/pypeit.core.pydl.rst
@@ -4,5 +4,5 @@ pypeit.core.pydl module
 .. automodule:: pypeit.core.pydl
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.qa.rst b/doc/api/pypeit.core.qa.rst
@@ -4,5 +4,5 @@ pypeit.core.qa module
 .. automodule:: pypeit.core.qa
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.rst b/doc/api/pypeit.core.rst
@@ -58,5 +58,5 @@ Module contents
 .. automodule:: pypeit.core
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.scattlight.rst b/doc/api/pypeit.core.scattlight.rst
@@ -4,5 +4,5 @@ pypeit.core.scattlight module
 .. automodule:: pypeit.core.scattlight
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.skysub.rst b/doc/api/pypeit.core.skysub.rst
@@ -4,5 +4,5 @@ pypeit.core.skysub module
 .. automodule:: pypeit.core.skysub
    :members:
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-   :undoc-members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.slitdesign_matching.rst b/doc/api/pypeit.core.slitdesign_matching.rst
@@ -4,5 +4,5 @@ pypeit.core.slitdesign\_matching module
 .. automodule:: pypeit.core.slitdesign_matching
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.spectrum.rst b/doc/api/pypeit.core.spectrum.rst
@@ -4,5 +4,5 @@ pypeit.core.spectrum module
 .. automodule:: pypeit.core.spectrum
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.standard.rst b/doc/api/pypeit.core.standard.rst
@@ -4,5 +4,5 @@ pypeit.core.standard module
 .. automodule:: pypeit.core.standard
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.telluric.rst b/doc/api/pypeit.core.telluric.rst
@@ -4,5 +4,5 @@ pypeit.core.telluric module
 .. automodule:: pypeit.core.telluric
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.trace.rst b/doc/api/pypeit.core.trace.rst
@@ -4,5 +4,5 @@ pypeit.core.trace module
 .. automodule:: pypeit.core.trace
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diff --git a/doc/api/pypeit.core.tracewave.rst b/doc/api/pypeit.core.tracewave.rst
@@ -4,5 +4,5 @@ pypeit.core.tracewave module
 .. automodule:: pypeit.core.tracewave
    :members:
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.transform.rst b/doc/api/pypeit.core.transform.rst
@@ -4,5 +4,5 @@ pypeit.core.transform module
 .. automodule:: pypeit.core.transform
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.wave.rst b/doc/api/pypeit.core.wave.rst
@@ -4,5 +4,5 @@ pypeit.core.wave module
 .. automodule:: pypeit.core.wave
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.wavecal.autoid.rst b/doc/api/pypeit.core.wavecal.autoid.rst
@@ -4,5 +4,5 @@ pypeit.core.wavecal.autoid module
 .. automodule:: pypeit.core.wavecal.autoid
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+   :undoc-members:
diff --git a/doc/api/pypeit.core.wavecal.defs.rst b/doc/api/pypeit.core.wavecal.defs.rst
@@ -4,5 +4,5 @@ pypeit.core.wavecal.defs module
 .. automodule:: pypeit.core.wavecal.defs
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diff --git a/doc/api/pypeit.core.wavecal.echelle.rst b/doc/api/pypeit.core.wavecal.echelle.rst
@@ -4,5 +4,5 @@ pypeit.core.wavecal.echelle module
 .. automodule:: pypeit.core.wavecal.echelle
    :members:
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+   :undoc-members: