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  • Penn Medicine / CHOP Center for Microbial Medicine
  • Philadelphia

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@microbialARC

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  1. microbialARC/THRESHER microbialARC/THRESHER Public

    THRESHER is a bacterial phylogenomics toolkit for strain and/or transmission clusters identification, genome profiling of substitution rates and MGEs, and bacterial evolution simulation.

    R 9

  2. microbialARC/DAMAGE microbialARC/DAMAGE Public

    Diagnostic Allele Method for Actionable Genomic Epidemiology

    R 1