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rachelgriffard/README.md

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network I'm currently working on a Nextflow pipeline and R package that can facilitate guild-based microbiome analysis

micro I just published a package for decontaminating low-biomass microbiome data with peer-reviewed article accessible here

🔗 My current goal is to learn more about Nextflow best practices to ensure my pipeline is the most effective it can be!

🧗‍♀️ Fun fact: I love to boulder in my free time

R tidyverse bioconductor bash linux mssql python anaconda Nextflow

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  1. bioinformatics-pipelines bioinformatics-pipelines Public

    Collections of scripts and pipelines for bioinformatics data

    R 1

  2. optima optima Public

    An open-source R package for the Tapestri platform for integrative single cell multiomics data analysis

    HTML 7

  3. micRoclean micRoclean Public

    An open-source R package containing decontamination pipelines for low-biomass microbiome data

    HTML 2

  4. rachelgriffard.github.io rachelgriffard.github.io Public

    Rachel Griffard-Smith's Blog

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