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VS Code keeps SCM repositories open after Guardex deletes a worktree if the active-session record disappears in the same cleanup pass. The companion now remembers observed worktree paths and sweeps deleted managed workspace folders so refresh can issue git.close even when session discovery no longer returns the deleted sandbox. Constraint: VS Code repo-scan ignores prevent future discovery but do not close already-open repositories. Rejected: Rely on git.repositoryScanIgnoredFolders alone | it cannot remove existing SCM providers. Confidence: high Scope-risk: narrow Directive: Keep the active-agents extension and template copy byte-for-byte aligned. Tested: node --test test/vscode-active-agents-session-state.test.js Tested: node --test test/vscode-active-agents-session-state.test.js test/metadata.test.js test/setup.test.js Not-tested: Manual VS Code window reload behavior after extension update.
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