odor-meso-gui

Graphical interface for odor meso experiments for Reimer Lab and Pfaffinger Lab at BCM.

Running with python virtual environment

1. Clone repository

git clone https://github.com/reimerlab/odor-meso-gui.git

2. Set up virtual environment with pip or conda

3. Inside the virtual env, go to the cloned directory and

pip install -e .

4. Set up dj.config globally

5. run the server with

python odor_meso_gui/index.py

6. Go to 0.0.0.0:8000 in your browser to start using the GUI

Running with docker

1. Clone repository

git clone https://github.com/reimerlab/odor-meso-gui.git

2. Go to the directory you just cloned.
3. Copy .env_template as .env and fill in the credentials
4. docker-compose up -d
5. Go to 0.0.0.0:8000 in your browser to start using the GUI

How to update if running with Docker?

1. go to the directory odor-meso-gui
2. git pull
3. docker-compose down
4. docker-compose up -d --build