IPO DataSets

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Tobias Kind edited this page Aug 24, 2015 · 2 revisions

The following datasets can be used to test and further develop/apply IPO.

Metabolite fingerprinting in human serum (HILIC method) data set (https://health.joanneum.at/IPO/MetaboliteFingerprintingTrainingSet.zip)
Lipidomics (RP-HPLC method) data set (https://health.joanneum.at/IPO/LipidomicsTrainingSet.zip)
Central carbon metabolism (IP-RP-HPLC method) data set (https://health.joanneum.at/IPO/CentralCarbonMetabolismTrainingSet.zip)

Source (Supplement data sets 1,2,3): BMC Bioinformatics 2015, 16:118 doi:10.1186/s12859-015-0562-8 http://www.biomedcentral.com/1471-2105/16/118

Additional independent metabolomics data sets for testing IPO can be found here:

A) NIH Metabolomics Workbench ftp://www.metabolomicsworkbench.org/Studies/

B) EBI MetaboLights ftp://ftp.ebi.ac.uk/pub/databases/metabolights/studies/public/