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Fragpipe data preprocesing cwl#19

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chaodi51 wants to merge 2 commits intomainfrom
chao/feature/pre-processing
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Fragpipe data preprocesing cwl#19
chaodi51 wants to merge 2 commits intomainfrom
chao/feature/pre-processing

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@chaodi51 chaodi51 commented Sep 3, 2025

Purpose/implementation Section

Develop workflow for Fragpipe pre-processing

What scientific question is your analysis addressing?

https://github.com/childrens-bti/internal-ticket-tracker/issues/347

What was your approach?

What GitHub issue does your pull request address?

Develop workflow for Fragpipe pre-processing

Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.

Which areas should receive a particularly close look?

Is there anything that you want to discuss further?

Is the analysis in a mature enough form that the resulting figure(s) and/or table(s) are ready for review?

Results

What types of results are included (e.g., table, figure)?

What is your summary of the results?

Reproducibility Checklist

  • The dependencies required to run the code in this pull request have been added to the project Dockerfile.

Documentation Checklist

  • This analysis module has a README and it is up to date.
  • The analytical code is documented and contains comments.

@chaodi51 chaodi51 requested review from jharenza and rjcorb September 3, 2025 20:32
@chaodi51 chaodi51 self-assigned this Sep 3, 2025
@chaodi51 chaodi51 changed the title Chao/feature/pre processing Fragpipe data preprocesing cwl Sep 3, 2025
@jharenza jharenza requested a review from sickler-alex October 8, 2025 19:16
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chaodi51 commented Dec 4, 2025

We'll have a full CWL, so don't need to merge this.

@chaodi51 chaodi51 closed this Dec 4, 2025
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3 participants