Computational workflow for the detection of genetic background (strain), major histocompatibility complex (MHC) haplotype and gender in mice using genomic next-generation sequencing data. The tool was developed to determine the suitability of MCCA lines for immunocompetent transplantations and to guide recipient selection.

Analysis pipelines for cancer genome sequencing in mice.

Repository for datasets used to test pipelines

Extraction of CRISPR counts written in rust