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A new method for rapidly calculating the synteny diversity can be accessed in the new GitHub repository: https://github.com/JiaoLab2021/SynDiv

Status: Open.

#12 In schneebergerlab/AMPRIL-genomes;

· wen-biao opened on Jul 12, 2023

Step2:get the coordinates of syntenic regions in all genomes

Status: Open.

#11 In schneebergerlab/AMPRIL-genomes;

· HongboTang opened on May 19, 2022

Synteny diversity calculation?

Status: Open.

#10 In schneebergerlab/AMPRIL-genomes;

· markcharder opened on Jan 11, 2022

pan-genome.plot.r

Status: Open.

#9 In schneebergerlab/AMPRIL-genomes;

· Murukarthick opened on May 25, 2021

pangenome file prepare

Status: Open.

#6 In schneebergerlab/AMPRIL-genomes;

· lin-jiahao opened on Oct 22, 2020

Synteny diversity calculation

Status: Open.

#5 In schneebergerlab/AMPRIL-genomes;

· Li-Chengyu opened on Sep 18, 2020

output of pangenome

Status: Open.

#4 In schneebergerlab/AMPRIL-genomes;

· liufy11 opened on Aug 31, 2020

annotation.config

Status: Open.

#2 In schneebergerlab/AMPRIL-genomes;

· liufy11 opened on Aug 29, 2020

about pan-genome analysis

Status: Open.

#1 In schneebergerlab/AMPRIL-genomes;

· sunnycqcn opened on Feb 27, 2020