Releases: skandlab/VarNet
Releases · skandlab/VarNet
v1.5.2
v1.5.1
- Reduce memory use in indel predict by reducing region size for prefetching reads to 250 kbp
- Reduce default batch size for predictions to 64 (--batch_size 64)
v1.5.0
Significant speed improvements in filtering and prediction using read caching to reduce I/O
v1.4.0
Speed up SNV filtering using numpy vectorization
v1.3.0
Significantly faster SNV and indel prediction using batch predictions.
Adjustable --batch-size (default 1000) arg provided to predict.py
v1.2.0
indel predicition fix
v1.1.0
github release edits