Research output aggregator

The goal of this project is to create a script to get a summarization for a research organization about the research output.
First target is to query and process information from DataCite.

The goal for this script is to create a list over research output where an organization is mentioned as:

• publisher
• creator with affiliation to the organization
• contributor with affiliation to the organization

Input: ROR-id and list of variants on the organization name.

Properties to collect for each research output

Roagg collects a fiew fields for each resource found and do de-duplications based on the DOI found in each source.

List of all properties in the aggregated results

Field	Type	Comment
publicationYear	integer	The year of publication, can be empty in some cases
resourceType	string	The resource type (free text string)
title	string	Title of the resource (first one if multiple)
publisher	string	Publisher (free text)
createdAt	string	Created date if available
updatedAt	string	Updatade date if availible
isPublisher	bool	True if the the publisher match the requested organisation
isFunder	bool	True if the the funder match the requested organisation
haveCreatorAffiliation	bool	True if the the any creator match the requested organisation
haveContributorAffiliation	bool	True if the the any contributor match the requested organisation
isLatestVersion	bool	True if the DataCite metadata indicates this beeing the latest version
isConceptDoi	bool	True if the DataCite metadata indicates this beeing a concept DOI
matchPublisherRor	bool	True if the ROR id for publisher match the ROR in the provided argument
matchCreatorAffiliationRor	bool	True if the ROR id for a creator affiliation match the ROR in the provided argument
matchContributorAffiliationRor	bool	True if the ROR id for a contributor affiliation match the ROR in the provided argument
matchFunderRor	bool	True if the ROR id for funder match the ROR in the provided argument
matchPublisherName	bool	True if any of the names supplied matches the publisher name in the resource
matchCreatorName	bool	True if any of the names supplied matches the creator name in the resource
matchContributorName	bool	True if any of the names supplied matches the contributor name in the resource
matchFunderName	bool	True if any of the names supplied matches the funder name in the resource
inDataCite	bool	True if the DOI was matched in the DataCite
inOpenAire	bool	True if the DOI was matched in OpenAire
inOpenAlex	bool	True if the DOI was matched in OpenAlex
inCrossRef	bool	True if the DOI was matched in CrossRef
dataCiteClientId	string	The client id for the organisation minting the DOI
dataCiteClientName	string	The human readable name of the minting organisation
dataCiteCitationCount	integer	Citation count for the resource provided by the DataCite API
dataCiteReferenceCount	integer	Reference count for the resource provided by the DataCite API
dataCiteViewCount	integer	View count for the resource provided by the DataCite API
dataCiteDownloadCount	integer	Download count for the resource provided by the DataCite API
openAireBestAccessRight	string	Access Rights for the resource indicated indicated by the OpenAire API
openAireIndicatorsUsageCountsDownloads	integer	Download count for the resource indicated by the OpenAire API
openAireIndicatorsUsageCountsViews	integer	View count for the resource provided by the OpenAire API
openAireId	string	Id for the resource in OpenAire
openAlexId	string	Id for the resource in OpenAlex
openAlexCitedByCount	integer	Citation count for the resource provided by the OpenAlex API
openAlexReferencedWorksCount	integer	Reference count for the resource provided by the OpenAlex API
titleWordCount	integer	Number of words in the title (useful for sorting in some cases)
referencedByDoi	string	DOI of object(s) (for instance papers) referencing this object (JSON list)

Install

pip install roagg

Run

List arguments:
roagg --help

Install dev

git clone git@github.com:snd-sweden/roagg.git
cd roagg
pip install -e .

Tests

Some tests are available, to run them:
python -m pytest

Development stuff to do

• ROR get name variants from ROR
• CLI add options to get name list from txt
• DataCite API build query for matching publisher and affiliation
• Publish as cmd tool on PyPI
• Crossref API build query for matching publisher and affiliation

Some example arguments

Chalmers with ror and name list:

roagg --ror https://ror.org/040wg7k59 --name-txt tests/name-lists/chalmers.txt --output chalmers.csv

GU with ror, name list and extra name not in the text file:

roagg --name "Department of Nephrology Gothenburg" --ror https://ror.org/01tm6cn81 --name-txt tests/name-lists/gu.txt --output data/gu.csv

KTH with ror and name list:

roagg --ror https://ror.org/026vcq606 --name-txt tests/name-lists/kth.txt --output data/kth.csv

KAU with ror:

roagg --ror https://ror.org/05s754026 --output kau.csv

License

MIT License