Notebooks that are used to produce the panels in the publication. This repository uses the grid searches from the original repository tissue.
Jackson, H. W. et al. The single-cell pathology landscape of breast cancer. Nature 578, 615–620 (2020).
Ali, H. R. et al. Imaging mass cytometry and multiplatform genomics define the phenogenomic landscape of breast cancer. Nature Cancer vol. 1 163–175 Preprint at https://doi.org/10.1038/s43018-020-0026-6 (2020).
Schürch, C. M. et al. Coordinated Cellular Neighborhoods Orchestrate Antitumoral Immunity at the Colorectal Cancer Invasive Front. Cell 182, 1341–1359.e19 (2020).