Large-scale cell segmentation with cellpose.
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Updated
May 20, 2025 - Python
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cellpose-segmentation
Here are 6 public repositories matching this topic...
End-to-end pipeline for spinal-cord microscopy segmentation with Cellpose, tiling, and mask stitching.
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Jun 17, 2025 - Jupyter Notebook
Segmentation of microscopy images and data analysis pipeline with a graphical user interface, powered by Cellpose.
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Sep 16, 2025 - Python
Cell seeding efficiency measurement using customized Cellpose SAM (cellpose4) models. The goal is to classify cells into four categories and calculate cell properties (number, average brightness, and average area) for each frame
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Jul 12, 2025 - Jupyter Notebook
Image processing pipeline for multi-modal images
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Aug 12, 2024 - Python
semi-automated postprocessing of cellpose segmented images
outlier-removal data-curation training-data-generation feret cellpose-segmentation ml-annotations cellpose-postprocessing incomplete-cell-removal damaged-cell-removal labeling-for-machine-learning ground-truth-generation
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Sep 16, 2025 - Python
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