A model to assess the global risk of Pierce's Disease of grapevines

Contains functions to simulate data from and fit SIR multievent models

"Slow recovery from a disease epidemic in the spotted hyena, a keystone social carnivore"

Analyzing dust concentration by land use type in coccidioidomycosis endemic regions in the CA Central Valley

Scripts used in the publication "Continent-wide recent emergence of a global pathogen in African amphibians" by Ghose et al. (2023)

Scripts used to prepare the "Pathogen invasion history elucidates contemporary host pathogen dynamics" publication by Vredenburg et al. (2019)

Predicting Ebolavirus disease risk and the role of African bat birthing

Schistosome mesocosm data for cercariae shedding rates in size structured host population

DiRenzo G. V., Che‐Castaldo C., Saunders S. P., Campbell Grant E. H., Zipkin E. F. 2019. Disease‐structured N‐mixture models: A practical guide to model disease dynamics using count data. Ecology and Evolution 9: 899–909.

This chapter of my dissertation leveraged publicly available data and unpublished data provided by collaborators to test the dilution effect hypothesis in the amphibian-Bsal system. This GitHub repository is where all files included in data collection, processing, and analysis can be found.

Plant functional diversity does not dilute virus infection, but community virus prevalence positively correlates with net C3 grass production