This is the repository for GraphPhage, a phage analysis tool that integrates phage and ICE discrimination, phage integration site prediction, phage lifestyle prediction, and phage host prediction.
Illumina short read assembly data pipeline for phage
Nanopore long read assembly data pipeline for phage genomes
The following is a bioinformatic workflow designed to find related phages and phage remnants. The workflow is not restricted to phages by any phage database.
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