neuro-scripts

Scripts for processing neuroimages

Name		Name	Last commit message	Last commit date
Latest commit History 15 Commits
motion_correction		motion_correction
pynrrd @ d514b0e		pynrrd @ d514b0e
.formatcommand		.formatcommand
.gitignore		.gitignore
.gitmodules		.gitmodules
.project		.project
.pydevproject		.pydevproject
1_GO_FS		1_GO_FS
23_GO_FS		23_GO_FS
2_GO_FS		2_GO_FS
3_GO_FS		3_GO_FS
4_GO_Qcache		4_GO_Qcache
ALL_GO_FS		ALL_GO_FS
DWIConvert		DWIConvert
GO_FS-123		GO_FS-123
GO_FS-23		GO_FS-23
README.md		README.md
addkey		addkey
anonymize		anonymize
anonymizeFile		anonymizeFile
aparcstats		aparcstats
append		append
asegstats		asegstats
b0avg.py		b0avg.py
centerImages.py		centerImages.py
chkseg		chkseg
compROI.sh		compROI.sh
convert-to-avi.sh		convert-to-avi.sh
copyTensors.py		copyTensors.py
dcm2nrrd.py		dcm2nrrd.py
dcm2xxx		dcm2xxx
dcm2xxxx		dcm2xxxx
eddycor.py		eddycor.py
flipGradVectors.py		flipGradVectors.py
fshome.csh		fshome.csh
fsl_dti_preproc.py		fsl_dti_preproc.py
fsl_fnirt.py		fsl_fnirt.py
fsl_tbss_copy.py		fsl_tbss_copy.py
fsl_tbss_randomise		fsl_tbss_randomise
fsl_view_tbss_stat		fsl_view_tbss_stat
goTbss		goTbss
gofs.py		gofs.py
initenv.csh		initenv.csh
joinTables		joinTables
lnsubdir.py		lnsubdir.py
mr2dcm		mr2dcm
mrtrix_compcsd.sh		mrtrix_compcsd.sh
mrtrix_grad.py		mrtrix_grad.py
mrtrix_grad2bvecs.py		mrtrix_grad2bvecs.py
myslices.py		myslices.py
myslicesdir		myslicesdir
newdirs.dat		newdirs.dat
nocompiz		nocompiz
nrrd.py		nrrd.py
play-stream.sh		play-stream.sh
prepareSlicerEnv.sh		prepareSlicerEnv.sh
qdecRoiStat		qdecRoiStat
qdecStats2Table		qdecStats2Table
reserie		reserie
roiStat		roiStat
seedTend2Points.py		seedTend2Points.py
slicerDwiFileConvert.sh		slicerDwiFileConvert.sh
slicerFileConvert.sh		slicerFileConvert.sh
slicerFilterFibers.sh		slicerFilterFibers.sh
slicerTensorScalar.sh		slicerTensorScalar.sh
slicerTractography.sh		slicerTractography.sh
statsNLS.py		statsNLS.py
surfer.log		surfer.log
ten2fiber		ten2fiber
test.py		test.py
tractDensityMap.py		tractDensityMap.py
transpose		transpose

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