fix plot.py to work with kaleido v1#418
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wdecoster merged 1 commit intowdecoster:masterfrom Jul 24, 2025
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That seems great! Do you have any insights regarding this change in kallisto:
From https://pypi.org/project/kaleido/#:~:text=Migrating%20from%20v0%20to%20v1 |
microbemarsh
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Jul 23, 2025
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Chrome uncertainties
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| # bring in kaleido and ensure Chrome is installed | ||
| import kaleido | ||
| # this will download a small headless Chrome build the first time you run it | ||
| kaleido.get_chrome_sync() |
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@wdecoster This should resolve the chrome issue from what I understand.
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Alright - that's great :-) Thanks so much! |
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#417
Updated
nanoplotter/plot.pyto use new kaleido v1 libraries/syntax.Performed minimal test with fresh pip install with a random file.fastq.gz. Test results can be found within this fork under
scripts/agm_test.Still need to update pip/conda builds to include this change.