This repository contains the code for the analysis of single-cell somatic copy number variations (CNVs) in the brains of Parkinson’s disease patients and healthy controls.
R version: 4.3.3 (2024-02-29)
Platform: x86_64-pc-linux-gnu (64-bit)
Operating System: Ubuntu 24.04.2 LTS
- Seurat 5.3.0
- dplyr 1.1.4
- ggplot2 3.5.2
- ggpubr 0.6.0
- data.table 1.17.0
- glmmTMB 1.1.11
- tidyr 1.3.1
- rtracklayer 1.62.0
- readxl 1.4.5
- openxlsx 4.2.8
- ggraph 2.2.1
- igraph 2.1.4
- FSA 0.10.0
- patchwork 1.3.0