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added 7 commits
January 26, 2026 17:25
For now just to test other way to organise the pipeline. The aim is future versions to raise deprecationerror when calling like that and instead save all separate ressults in sesparte files
find_monitor_frames returns row index of the frame_log, when we merge on the FrameIndex it fails if FrameIndex.iloc[0] != 0 Switch to use index so that we can start recording frame after initial bonsai setup
The useful function should be integrated in a lab repo
All filters of ROI should work on traces, since traces must come from an but not the other way round as we can have multiple way to extract from one ROI. Separate in pipeline and use ASt only on traces (which is used in most downstream functions)
If we still have these warnings, we need to solve them. Not ignore
Add option to manually specify the rs/of bins, to provide extent and to provide the tick_dict. All these are supposed to be automatically calculated from log_range but it makes it hard to handle treadmill data where the bins should not be square.
Force array copy and conversion to float to please pandas 3
- specify bins for treadmill/closed loop plot - use_full_range for RS_OF_matrix
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v2.0.4
Main changes
Bugfix
Minor
Before bugfix:
After:
