plot

Any plotting function that is consided reusable is included in this module within a descriptive filename. Generally, files in thus module should not contain more than one plotting task.

Contents

plot_confusion_matrix

Function to plot a confusion matrix based on the true labels and the predictions from a classification task.

plot_worm_trajectories

Plot trajectories of worms, based on data from featuresN files.

Functions available to the user:

• plot_well_trajectories
• plot_multiwell_trajectories

plot_PCA_decomposition

Function to do PCA and plot the decomposition in 2D or 3D with the option of coloring the points by group.

plot_plate_trajectories_with_raw_video_background

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