Skip to content

Actions: nhoffman/dada2-nf

Actions

Run pipeline tests and deploy to registry

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
test-publish.yml
25 workflow runs
25 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Run pipeline tests and deploy to registry Run pipeline tests and deploy to registry #122: Scheduled
21m 10s master
master
21m 10s
Update dependencies Run pipeline tests and deploy to registry #121: Pull request #92 opened by dhoogest
32m 6s 91-dependencies
91-dependencies
32m 6s
bump vsearch, infernal Run pipeline tests and deploy to registry #120: Commit 6261cfd pushed by dhoogest
15m 41s 91-dependencies
91-dependencies
15m 41s
require non-empty seqs in trimmed fastq Run pipeline tests and deploy to registry #119: Commit f62c7ef pushed by dhoogest
15m 43s 91-dependencies
91-dependencies
15m 43s
add uv, install python deps into virtualenv and manipulate PATH Run pipeline tests and deploy to registry #118: Commit 7b47362 pushed by dhoogest
19m 47s 91-dependencies
91-dependencies
19m 47s
base pip, no pip3 on ubuntu24.04 Run pipeline tests and deploy to registry #117: Commit 4f6780c pushed by dhoogest
17m 16s 91-dependencies
91-dependencies
17m 16s
add wget to apt list Run pipeline tests and deploy to registry #116: Commit b7635cf pushed by dhoogest
16m 38s 91-dependencies
91-dependencies
16m 38s
bump base image, R, dada2-nf version Run pipeline tests and deploy to registry #115: Commit dc90e16 pushed by dhoogest
17m 38s 91-dependencies
91-dependencies
17m 38s
Merge branch 'seqmaps' of github.com:nhoffman/dada2-nf into seqmaps Run pipeline tests and deploy to registry #114: Commit 7195924 pushed by crosenth
2m 59s seqmaps
seqmaps
2m 59s
Run pipeline tests and deploy to registry Run pipeline tests and deploy to registry #113: Scheduled
19m 14s master
master
19m 14s
Working beta, need to validate Run pipeline tests and deploy to registry #112: Commit fd08ad0 pushed by crosenth
3m 21s seqmaps
seqmaps
3m 21s
Incorporating seqmaps into workflow script Run pipeline tests and deploy to registry #111: Commit 597ae40 pushed by crosenth
5m 55s seqmaps
seqmaps
5m 55s
Run pipeline tests and deploy to registry Run pipeline tests and deploy to registry #110: Scheduled
34m 40s master
master
34m 40s
Output seqmaps for R1 R2 and merged reads Run pipeline tests and deploy to registry #109: Commit 84cfe2e pushed by crosenth
34m 3s seqmaps
seqmaps
34m 3s
Run pipeline tests and deploy to registry Run pipeline tests and deploy to registry #108: Scheduled
32m 48s master
master
32m 48s
2.0.4 release Run pipeline tests and deploy to registry #107: Commit da0cb36 pushed by crosenth
32m 28s 2.0.4
2.0.4
32m 28s
Run pipeline tests and deploy to registry Run pipeline tests and deploy to registry #106: Scheduled
31m 21s master
master
31m 21s
Run pipeline tests and deploy to registry Run pipeline tests and deploy to registry #105: Scheduled
31m 29s master
master
31m 29s
Run pipeline tests and deploy to registry Run pipeline tests and deploy to registry #104: Scheduled
32m 45s master
master
32m 45s
adjust cluster tactic for grouping step Run pipeline tests and deploy to registry #103: Pull request #90 synchronize by dhoogest
13m 51s change-cluster-tactic
change-cluster-tactic
13m 51s
add --sizein arg Run pipeline tests and deploy to registry #102: Commit 8ec8ca5 pushed by dhoogest
14m 24s change-cluster-tactic
change-cluster-tactic
14m 24s
adjust cluster tactic for grouping step Run pipeline tests and deploy to registry #101: Pull request #90 synchronize by dhoogest
32m 47s change-cluster-tactic
change-cluster-tactic
32m 47s
more settings fiddling Run pipeline tests and deploy to registry #100: Commit 6199926 pushed by dhoogest
40m 3s change-cluster-tactic
change-cluster-tactic
40m 3s
Run pipeline tests and deploy to registry Run pipeline tests and deploy to registry #99: Scheduled
31m 19s master
master
31m 19s
Run pipeline tests and deploy to registry Run pipeline tests and deploy to registry #98: Scheduled
35m 22s master
master
35m 22s