Repositories list

• whobpyt

  Public
  Whole-Brain Modelling in PyTorch

  Python

  •

  MIT License

  •33•35•32•27•Updated Mar 19, 2026Mar 19, 2026

• griffithslab-website

  Public
  TeX

  •2•0•2•2•Updated Mar 10, 2026Mar 10, 2026

• rest_fnirs-eeg_experiment

  Public
  Python

  •1•2•0•0•Updated Jan 28, 2026Jan 28, 2026

• GriffithsEtAl2026__TSHSOTHC

  Public
  Accompanying code and materials for Griffiths et al. "The Spherical Harmonic Structure of the Human Connectome"

  0•0•0•0•Updated Nov 12, 2025Nov 12, 2025

• brainmodes2025-website

  Public
  BrainModes 2025 Conference Website

  SCSS

  •

  GNU General Public License v3.0

  •4•0•0•0•Updated Oct 6, 2025Oct 6, 2025

• Bastiaens2025_CorticothalamicRestingParametrization

  Public
  Code for "Corticothalamic circuit parametrization of brain region and aging variations in resting-state alpha activity"

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Aug 5, 2025Aug 5, 2025

• Kadak2025_alpha-subharmonics-rtms-eeg

  Public
  Jupyter Notebook

  •1•1•0•0•Updated Aug 1, 2025Aug 1, 2025

• SynPy

  Public
  Python wrapper for interfacing with NFTsim; designed for modelling CT plasticity dynamics

  Jupyter Notebook

  •0•0•0•0•Updated Jul 29, 2025Jul 29, 2025

• Bastiaens2025_AlphaModels

  Public
  Jupyter Notebook

  •

  MIT License

  •3•5•0•0•Updated Jul 4, 2025Jul 4, 2025

• OHBM2025-NFT-Course

  Public
  SCSS

  •

  GNU General Public License v3.0

  •2•0•0•0•Updated Jun 23, 2025Jun 23, 2025

• Momi_et_al_2025

  Public
  Jupyter Notebook

  •3•2•0•0•Updated May 8, 2025May 8, 2025

• WBMLangBetaERDS

  Public
  Python

  •1•0•0•0•Updated Apr 23, 2025Apr 23, 2025

• brainhack2025_githubdemo

  Public
  Build and/or flex your git+github gunz

  19•0•0•0•Updated Apr 22, 2025Apr 22, 2025

• BastiaensAlphaModels_NeuroLibre

  Public
  NeuroLibre version of Bastiaens et al. paper "A comprehensive investigation of intracortical and corticothalamic models of the alpha rhythm"

  Jupyter Notebook

  •

  MIT License

  •3•0•1•1•Updated Dec 13, 2024Dec 13, 2024

• neurolibre_template_test

  Public
  Jupyter Notebook

  •

  GNU General Public License v3.0

  •4•0•0•1•Updated Dec 11, 2024Dec 11, 2024

• FieldsInstitute_MathNeuro

  Public
  Alt website source for 2025 Fields Institute Thematic Program in Mathematics of Neuroscience

  TeX

  •2•0•3•0•Updated Jul 18, 2024Jul 18, 2024

• HaritaEtAl2024_whobpyt-network-sc-lesions

  Public
  Harita et al., 2024: State-dependent relationship between lower and higher order networks in fMRI brain dynamics

  Jupyter Notebook

  •

  MIT License

  •2•1•0•0•Updated Jun 25, 2024Jun 25, 2024

• mne-python

  Public
  MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •1.5k•0•0•0•Updated Jun 21, 2024Jun 21, 2024

• OHBM2024-educational-course

  Public
  1•0•0•0•Updated Jun 14, 2024Jun 14, 2024

• HaritaEtAl2024_tvb-negative-correlations

  Public
  Jupyter Notebook

  •

  MIT License

  •1•0•0•0•Updated Apr 22, 2024Apr 22, 2024

• MorshedzadehEtAl2024_sleep-eeg-nft

  Public
  Repository for the code supporting Morshedzadeh et al. (2024) - Corticothalamic modelling of sleep neurophysiology with applications to mobile EEG

  MIT License

  •0•0•0•0•Updated Apr 20, 2024Apr 20, 2024

• mne-python_zatdfnirs

  Public archive
  MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •1.5k•0•0•0•Updated Apr 2, 2024Apr 2, 2024

• HaritaEtAl2022_tms-efield-fc

  Public
  Mapping connectivity of TMS target sites for major depression (Harita et al. Front Psych 2022)

  Jupyter Notebook

  •3•0•0•0•Updated Mar 18, 2024Mar 18, 2024

• whobpyt-data

  Public
  0•0•0•0•Updated Mar 13, 2024Mar 13, 2024

• dl-paramest-for-neurophys-models

  Public
  Jupyter Notebook

  •

  MIT License

  •4•13•0•1•Updated Jan 17, 2024Jan 17, 2024

• OHBM2023-educational-course

  Public
  SCSS

  •

  MIT License

  •2•0•0•0•Updated Jul 18, 2023Jul 18, 2023

• OHBM-whole-brain-modelling-course

  Public
  SCSS

  •

  MIT License

  •2•6•0•0•Updated Jul 18, 2023Jul 18, 2023

• OHBM-educational-course

  Public
  Python

  •0•0•4•0•Updated Jun 16, 2023Jun 16, 2023

• PyTepFit

  Public
  Whole-brain modelling of TMS-EEG TEPs (Momi et al. ELife 2023)

  Jupyter Notebook

  •

  MIT License

  •5•19•1•0•Updated Apr 26, 2023Apr 26, 2023

• gh-pages_hugo-academic_test

  Public
  TeX

  •

  MIT License

  •4•0•0•0•Updated Oct 26, 2022Oct 26, 2022