Repositories list

• Liuzlab.github.io

  Public
  TeX

  •

  MIT License

  •25•0•0•0•Updated Feb 28, 2026Feb 28, 2026

• MARRVEL2

  Public
  TypeScript

  •4•0•2•0•Updated Jan 30, 2026Jan 30, 2026

• AI_MARRVEL

  Public
  AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis

  Python

  •

  GNU General Public License v3.0

  •10•20•1•0•Updated Dec 18, 2025Dec 18, 2025

• .github

  Public
  Shell

  •0•0•0•0•Updated Nov 21, 2025Nov 21, 2025

• PINN-extrapolation

  Public
  Code for the paper titled "Improving physics-informed neural network extrapolation via transfer learning and adaptive activation functions"

  Python

  •1•4•0•0•Updated Sep 21, 2025Sep 21, 2025

• rgr_modelMatcher

  Public
  Researcher Gene Registry. Originally developed for the Canadian Rare Disease Models & Mechanisms Network

  Java

  •

  Apache License 2.0

  •7•0•0•0•Updated Jul 1, 2025Jul 1, 2025

• consol

  Public
  llm

  Jupyter Notebook

  •0•5•0•0•Updated Jun 30, 2025Jun 30, 2025

• skydocs

  Public
  0•0•0•0•Updated Jun 30, 2025Jun 30, 2025

• PMC-Patients

  Public
  PMC-Patients

  Python

  •

  Other

  •12•0•0•0•Updated Mar 4, 2025Mar 4, 2025

• ReSort_manuscript

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

• AI_Group_Discussion

  Public
  0•1•0•0•Updated Sep 4, 2024Sep 4, 2024

• Mouse-AAV-OSN

  Public
  Computational analysis for "Comparative Analysis of AAV Serotypes for the Transduction of Olfactory Sensory Neurons" by Belfort and Jia et al. 2024

  Jupyter Notebook

  •

  MIT License

  •1•1•0•0•Updated Aug 30, 2024Aug 30, 2024

• OverlapPlots

  Public
  Overlap plots bioconductor package for gene length analysis.

  R

  •

  Creative Commons Attribution 4.0 International

  •1•0•0•0•Updated Jun 3, 2024Jun 3, 2024

• rgr

  Public
  Researcher Gene Registry. Originally developed for the Canadian Rare Disease Models & Mechanisms Network

  Java

  •

  Apache License 2.0

  •7•0•0•0•Updated Nov 17, 2023Nov 17, 2023

• RESORT

  Public
  An approach to enhance reference-based spatial deconvolution methods

  Python

  •0•0•0•0•Updated Sep 5, 2023Sep 5, 2023

• SPA-STOCSY

  Public
  HTML

  •0•1•0•0•Updated Jul 30, 2023Jul 30, 2023

• SPA_STOCSY

  Public
  HTML

  •0•0•0•0•Updated Jul 26, 2023Jul 26, 2023

• NMRQNet

  Public
  HTML

  •0•7•1•0•Updated Apr 13, 2023Apr 13, 2023

• power_curves_git

  Public
  Power Curves User Guide and Example Data

  R

  •0•0•0•0•Updated Nov 9, 2022Nov 9, 2022

• MIST_source_code

  Public
  Code for MIST manuscript revision

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 28, 2022Oct 28, 2022

• ClinPhen_for_MARRVELAI

  Public
  Temporary repository for ClinPhen with non-stringent option.

  Python

  •

  Other

  •0•0•0•0•Updated Sep 19, 2022Sep 19, 2022

• MIST_manuscript

  Public
  Source code to reproduce the figures in MIST manuscript

  Jupyter Notebook

  •0•0•0•0•Updated Apr 28, 2022Apr 28, 2022

• TraceQC

  Public
  HTML

  •

  Other

  •1•6•0•0•Updated Apr 17, 2022Apr 17, 2022

• TraceQC-manuscript

  Public
  R

  •0•0•0•0•Updated Sep 15, 2021Sep 15, 2021

• LSDgenes

  Public
  LSD genes burden analysis

  Jupyter Notebook

  •0•0•0•0•Updated Feb 13, 2021Feb 13, 2021

• paper_deconvBenchmark

  Public
  Including source code and raw data of the deconvolution benchmark paper.

  R

  •

  MIT License

  •3•8•1•0•Updated Feb 8, 2021Feb 8, 2021

• ER_positive_breast_cancer-manuscirpt

  Public
  R

  •0•0•0•0•Updated Oct 26, 2020Oct 26, 2020

• CRISPR_bone_metastasis-manuscript

  Public
  R

  •0•0•0•0•Updated Oct 26, 2020Oct 26, 2020

• TraceQC-Supplementary

  Public
  HTML

  •0•0•0•0•Updated Jun 6, 2020Jun 6, 2020

• crossSpecies_RNAseq

  Public
  Python

  •0•0•0•0•Updated Feb 12, 2020Feb 12, 2020